Discovering cellular protein‐protein interactions: Technological strategies and opportunities - Titeca - 2019 - Mass Spectrometry Reviews - Wiley Online Library
DIA mass spectrometry | Nature Methods
Nature Methods on Twitter: "Avant-garde: a tool for refining DIA-mass spectrometry data. @JaffeLab https://t.co/zIWJ9PUYiz… "
In silico spectral libraries by deep learning facilitate data-independent acquisition proteomics | Nature Communications
Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry | Nature Communications
Quantifying Plant Dynamic Proteomes by SWATH-based Mass Spectrometry: Trends in Plant Science
DDIA: data dependent-independent acquisition proteomics - DDA and DIA in a single LC-MS/MS run | bioRxiv
Optimization of Experimental Parameters in Data-Independent Mass Spectrometry Significantly Increases Depth and Reproducibility
PulseDIA: in-depth data independent acquisition mass spectrometry using enhanced gas phase fractionation | bioRxiv
The workflow of DeepNovo-DIA for de novo sequencing of DIA... | Download Scientific Diagram
Simultaneous Improvement in the Precision, Accuracy, and Robustness of Label-free Proteome Quantification by Optimizing Data Manipulation Chains | Molecular & Cellular Proteomics
Chromatogram libraries improve peptide detection and quantification by data independent acquisition mass spectrometry | Nature Communications
Deep learning enables de novo peptide sequencing from data-independent-acquisition mass spectrometry | Nature Methods
Group-DIA: analyzing multiple data-independent acquisition mass spectrometry data files | Nature Methods
CompMS | MS-DIAL
DIA mass spectrometry | Nature Methods
Robust, reproducible and quantitative analysis of thousands of proteomes by micro-flow LC–MS/MS | Nature Communications
Mass spectrometry and proteomics
Data-Independent Acquisition: A Superior Technique in Mass Spectrometry? | Technology Networks
Prosit: proteome-wide prediction of peptide tandem mass spectra by deep learning | Nature Methods
Quantitative Proteome Landscape of the NCI-60 Cancer Cell Lines - ScienceDirect
Rapid and site-specific deep phosphoproteome profiling by data-independent acquisition without the need for spectral libraries | Nature Communications
Mass-spectrometric exploration of proteome structure and function | Nature
